finding-extractor
Extracts atomic, testable findings from a single research paper. Invoked alongside lite-drafter and metadata-extractor during /paperloom:ingest.
An agent is a specialist Claude hands a whole job to, with its own tools and its own context.
22 agents across 226 plugins.
Extracts atomic, testable findings from a single research paper. Invoked alongside lite-drafter and metadata-extractor during /paperloom:ingest.
Compares new findings against a shortlist of existing findings in the vault and proposes typed edges (supports / contradicts / extends / uses / similar-to).…
Produces a short, triage-grade paper summary — Key Takeaways, Background, Main Idea & Summary, Critique. Invoked alongside metadata-extractor and…
Adversarial Architect subagent for the design-architecture skill. Red-teams the system by thinking like an attacker or a chaos engineer: malformed inputs, LLM…
Data Architect subagent for the design-architecture skill. Analyzes data models, intermediate file formats, schema design, edge metadata sidecar,…
Software Architect subagent for the design-architecture skill. Analyzes code structure, module design, abstractions, interfaces, coupling, cohesion,…
Reviews football chart and visualisation code for correctness, conventions, and rendering issues. Optionally inspects the rendered output in a browser.
Reviews football data code for common mistakes. Use after the user writes data processing, analysis, or visualisation code that works with football event data,…
Designs end-to-end football data pipelines. Use when the user describes a goal ('I want to analyse pressing in the Premier League') and needs help planning the…
Autonomous financial analyst powered by EODHD market data. Performs multi-source equity research — fundamentals, valuation, technical analysis, risk metrics,…
Execute ENCODE ATAC-seq pipeline from FASTQ to accessibility peaks with Tn5 correction, Bowtie2, and MACS2
Execute ENCODE ChIP-seq pipeline from FASTQ to peaks and signal tracks using BWA-MEM, MACS2, and IDR
Execute CUT&RUN pipeline from FASTQ to peaks with Bowtie2, SEACR, and spike-in normalization
Use when asked to analyze BigQuery SQL files across a project for cost optimization opportunities, estimate total query costs, or audit a codebase for…
Use when asked to review all SQL files in a project or directory for BigQuery anti-patterns, scan a codebase for SQL performance issues, or audit BigQuery…
Use when asked to analyze table schemas across a project, recommend partitioning and clustering strategies for existing tables, audit schema design, or…
Extracts paper metadata (authors, date, venue, fields, DOI/arxiv ID) and a paper-quality assessment (credibility, experimental rigor, reproducibility) from a…
System Architect subagent for the design-architecture skill. Analyzes overall system design, pipeline orchestration, component boundaries, re-entry points, and…
Execute ENCODE DNase-seq pipeline from FASTQ to hotspots and footprints using BWA, Hotspot2, and HINT-ATAC
Execute ENCODE Hi-C pipeline from FASTQ to contact matrices and loop calls using BWA, pairtools, Juicer, and HiCCUPS
Execute ENCODE RNA-seq pipeline from FASTQ to gene quantification using STAR 2-pass alignment and RSEM/Kallisto
Execute ENCODE WGBS pipeline from FASTQ to methylation calls using Bismark and MethylDackel
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