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/auditing-subgroup-fairness

Audit an OpenMed NER or de-identification model for performance disparities across demographic subgroups (sex, age band, race/ethnicity when available) using openmed.eval.fairness_report. Use when the user wants per-subgroup recall and leakage, wants to check whether

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$ npx -y skills add maziyarpanahi/openmed --skill auditing-subgroup-fairness --agent claude-code

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How this skill gets triggered: by you, by Claude, or both.

  • Fires itselfAuto-invocation. Claude auto-loads it when your prompt matches the work.Auto-invocation is when the right skill fires by itself at the right moment, driven by a FLOW.md router and a hook, instead of you invoking it by name. It is the difference between a skill being installed and a skill actually getting used.Read the full definition →
  • You can call itInvoke it directly when you want it.
  • Slash command/auditing-subgroup-fairness

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Audit an OpenMed NER or de-identification model for performance disparities across demographic subgroups (sex, age band, race/ethnicity when available) using openmed.eval.fairness_report. Use when the user wants per-subgroup recall and leakage, wants to check whether

SKILL.md

auditing-subgroup-fairness.SKILL.md
name: auditing-subgroup-fairness
description: "Audit an OpenMed NER or de-identification model for performance disparities across demographic subgroups (sex, age band, race/ethnicity when available) using openmed.eval.fairness_report. Use when the user wants per-subgroup recall and leakage, wants to check whether de-identification under-protects a group, wants to surface a documentation gap where subgroup data is missing, or needs equalized-odds-style disparity numbers for a clinical model. Trigger on \"fairness\", \"subgroup\", \"bias audit\", \"disparity\", \"equalized odds\", \"under-protected group\", \"per-group recall\", or \"STANDING Together\" for an OpenMed model."
license: Apache-2.0
metadata:
  project: OpenMed
  category: evaluation-quality
  pairs: adjacent
  version: "1.0"

Auditing Subgroup Fairness

An aggregate pass can hide a group the model fails. For de-identification that failure has a name: **under-protection** — PHI that leaks more often for one demographic group than another. `openmed.eval.fairness_report` slices leakage and recall by gold-span group so disparities surface before deployment, not after a breach.

When to use this skill

  • You want per-subgroup recall and leakage for a de-id or NER model.
  • You suspect (or must rule out) that one group is under-protected.
  • You need disparity numbers for a clinical AI governance review.
  • You need to document *which* subgroups you couldn't evaluate (the data gap).

What it measures

For each surrogate group `fairness_report` returns:

  • **leakage_rate** — fraction of that group's gold PHI characters left exposed

(the de-id harm metric).

  • **recall** — fraction of that group's gold spans detected.
  • **leakage_disparity** — `max - min` leakage across groups (the gap to close).
  • **worst_group** / **worst_group_leakage** — the most-failed group.

Group membership comes from a `group` tag in each gold span's `metadata` (keys `group`, `demographic_group`, or `surrogate_group`); ungrouped spans fall into `unspecified`.

Quick start

from openmed.eval import fairness_report

# Gold fixtures must tag spans with a surrogate group, e.g.
#   {"start": 4, "end": 12, "label": "PERSON", "metadata": {"group": "female"}}
fair = fairness_report(
    "OpenMed/Privacy-PII-Detection",
    "golden",                 # named suite, or pass a list of fixtures
    device="cpu",
)

print("leakage disparity:", fair.leakage_disparity)
print("worst group      :", fair.worst_group, fair.worst_group_leakage)
for group, m in sorted(fair.per_group.items()):
    print(f"  {group:14s} recall={m.recall:.3f}  leakage={m.leakage_rate:.4f}")

# Under-protection alarm: any group leaking more than the rest.
LEAKAGE_GAP_LIMIT = 0.0       # leakage-first: ideally zero leakage everywhere
assert fair.leakage_disparity <= LEAKAGE_GAP_LIMIT or fair.worst_group_leakage == 0

`FairnessReport.to_dict()` is JSON-ready and PHI-free — drop it straight into a model card.

Workflow

1. **Tag the gold corpus by group.** Add a synthetic `group` to each PHI span's `metadata` (sex, age band, race/ethnicity surrogate). Use synthetic surrogates, not real protected attributes (see `building-gold-corpus`). 2. **Run `fairness_report`** on the model + suite. 3. **Read leakage first, recall second.** For de-id, a group with higher leakage is under-protected — that is the headline finding. 4. **Compute the disparity** (`leakage_disparity`) and locate `worst_group`. Equalized-odds framing: equal true-positive (recall) *and* equal leakage across groups. 5. **Document the gap.** If race/ethnicity surrogates are absent, report that the audit could not cover them — most clinical NLP studies omit race entirely, so silence is the default failure mode, not equity. 6. **Feed it forward.** Put per-group numbers and the gap into the model card and the governance review.

Hand-off to / from OpenMed

  • **From** `building-gold-corpus`: supplies group-tagged synthetic fixtures.
  • **From** `evaluating-with-leakage-gates`: an aggregate `RELEASABLE` decision

should be paired with this audit — overall pass, subgroup fail is exactly the trap this catches.

  • **To** `authoring-model-cards`: `FairnessReport.to_dict()` fills the

quantitative-analysis / subgroup section.

  • **Pairs with** `benchmarking-clinical-ner`: same run, different slice (label vs

group).

Edge cases & gotchas

  • **Under-protection is the de-id harm; lead with leakage.** A group with equal

recall but higher leakage is still failed.

  • **The race documentation gap is the norm.** Most clinical NLP corpora don't

record race/ethnicity, so most fairness audits silently can't measure it. Report the absence explicitly — don't let missing data read as parity.

  • **`unspecified` is not a real group.** A pile of spans in `unspecified` means

your gold isn't tagged; fix the corpus before trusting the disparity.

  • **Small groups give noisy rates.** Report span counts (`span_count`,

`total_chars`) alongside rates; a 1-of-2 leak isn't a 50% population rate.

  • **Synthetic surrogates only.** Never store real protected attributes in eval

fixtures; use fabricated group labels for slicing.

  • **Disparity ≈ 0 with high leakage everywhere is not "fair".** Equal failure is

still failure — check absolute leakage, not just the gap.

Standards & references

  • STANDING Together — reporting standards for health-dataset diversity &

documentation: https://www.datadiversity.org/

  • Hardt, Price, Srebro, *Equality of Opportunity in Supervised Learning*

(equalized odds): https://arxiv.org/abs/1610.02413

  • Chen et al., *Ethical ML in Health Care* (subgroup performance in clinical NLP):

https://doi.org/10.1146/annurev-biodatasci-092820-114757

  • OpenMed source of truth: `openmed/eval/fairness.py`

(`fairness_report`, `FairnessReport`, `FairnessGroupMetrics`).

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