Skip to content
Development
Skill

/cortex-navigate-knowledge

Navigate the knowledge graph — trace entity relationships, explore causal chains, drill into memory clusters, and traverse co-access paths. Use when the user asks 'how are these related', 'what connects X to Y', 'show me the knowledge graph', 'trace the relationship', 'what

From plugin
hypermnesia-mcp
7613 skills5 agents4 commands1 MCP

Claude Code

$ npx -y skills add cdeust/Cortex --skill cortex-navigate-knowledge --agent claude-code

SKILL.md

cortex-navigate-knowledge.SKILL.md
name: cortex-navigate-knowledge
description: "Navigate the knowledge graph — trace entity relationships, explore causal chains, drill into memory clusters, and traverse co-access paths. Use when the user asks 'how are these related', 'what connects X to Y', 'show me the knowledge graph', 'trace the relationship', 'what caused X', 'drill down into', 'explore connections', or when you need to understand the web of relationships between concepts, entities, and memories."

Navigate Knowledge — Graph Exploration and Causal Chains

Keywords

knowledge graph, relationships, connections, causal chain, how are these related, what connects, drill down, explore, navigate, entity graph, trace, cause and effect, related to, linked to, co-access, cluster

Overview

Cortex maintains a knowledge graph of entities (people, technologies, concepts, files) and their relationships extracted from memories. This skill lets you traverse that graph — follow causal chains, explore co-access patterns, drill into fractal memory clusters, and understand how different pieces of knowledge connect.

**Use this skill when:** You need to understand relationships between concepts, trace cause-and-effect chains, or explore a topic area systematically.

Workflow

Step 1: Trace Causal Chains

Follow entity relationships through the knowledge graph:

cortex:get_causal_chain({
  "entity": "PostgreSQL",
  "direction": "both",
  "max_depth": 3
})

Returns a chain of entities connected by typed relationships (causes, uses, depends_on, related_to, etc.). Direction can be `"forward"` (effects), `"backward"` (causes), or `"both"`.

Step 2: Navigate Co-Access Paths

Find memories frequently accessed together using Successor Representation:

cortex:navigate_memory({
  "memory_id": <starting_memory_id>,
  "depth": 2,
  "max_nodes": 20
})

Returns a graph of memories connected by co-access frequency — revealing implicit relationships that aren't in the explicit knowledge graph.

Step 3: Hierarchical Exploration

Browse memories through fractal clusters (L0 = broad, L1 = mid, L2 = specific):

cortex:recall_hierarchical({
  "query": "authentication system",
  "levels": 3
})

Then drill into any interesting cluster:

cortex:drill_down({
  "cluster_id": "<cluster from hierarchical recall>",
  "level": "L1"
})

Step 4: Detect Structural Gaps

Find disconnected or under-connected areas:

cortex:detect_gaps({
  "domain": "<optional>"
})

Returns isolated entities, sparse domains, and temporal drift — areas where your knowledge graph has holes.

Use Cases

**Understanding a new codebase:** 1. Recall hierarchical to get broad topic clusters 2. Drill down into the most relevant cluster 3. Navigate co-access paths from key memories 4. Trace causal chains for core entities

**Debugging with context:** 1. Recall memories about the error/module 2. Get causal chain for the affected entity 3. Navigate to co-accessed memories (past fixes, related patterns)

**Architecture review:** 1. Get causal chains for key components 2. Detect gaps in architectural documentation 3. Assess coverage for each module

Tips

  • **Start broad, go narrow**: Use hierarchical recall first, then drill down and navigate from specific memories
  • **Causal chains reveal architecture**: The knowledge graph captures how components depend on each other — useful for impact analysis
  • **Co-access reveals workflow**: Memories accessed together often represent a workflow or related concern, even if they're not explicitly linked
Read more
@cdeust
Ships withhypermnesia-mcp

Cross-platform persistent memory MCP for Codex, Gemini CLI, Claude Code, and other local MCP hosts. 36 cited neuroscience mechanisms, local-first SQLite/PostgreSQL, hybrid retrieval, decay-based consolidation, and reproducible benchmarks. Claude adds optional automatic lifecycle hooks.

7613 skills5 agents1 MCP
Get the whole plugin

Stars on GitHub

Momentum

stars in total
76
Star history of cdeust/Cortex on GitHub, a chart by star-history.com

Other skills on hypermnesia-mcp.

cortex-automate

cortex-automate

Set up automation — prospective memory triggers, neuro-symbolic rules, and CLAUDE.md sync. Use when the user says 'remind me…

cortex-consolidate

cortex-consolidate

Run memory maintenance — decay old memories, compress stale content, consolidate episodic memories into semantic knowledge, and…

cortex-debug-memory

cortex-debug-memory

Debug and fix memory system issues — validate memories, rate quality, manage protection, forget bad memories, and restore from…

cortex-import

cortex-import

Import memories from other AI memory systems into Cortex. Supports claude-mem (SQLite), Claude Desktop sessions, ChatGPT web…

cortex-profile

cortex-profile

View and manage your cognitive profile — how you think, work patterns, blind spots, and cross-domain connections. Use when the…

More skills from other plugins.

brainstorming
Auto-invoked

brainstorming

You MUST use this before any creative work - creating features, building components, adding functionality, modifying behavior, or…

@obra@obraInstall Skill
ask-matt

ask-matt

Ask which skill or flow fits your situation. A router over the skills in this repo.

skills11d309k
@mattpocock@mattpocockInstall Skill
accessibility
Auto-invoked

accessibility

Design, implement, and audit accessible UI to WCAG 2.2 Level AA across Web, iOS, and Android — semantic ARIA roles and labels,…

ecc12d293k
@affaan-m@affaan-mInstall Skill
compiler-commit

compiler-commit

Use when you want to verify compiler changes and commit with the correct convention. Runs tests, lint, and format, then commits…

react1d252k
@facebook@facebookInstall Skill

Questions about cortex-navigate-knowledge.

Which coding agents can use cortex-navigate-knowledge?
cortex-navigate-knowledge installs in Claude Code, Codex, Cursor, Gemini CLI, GitHub Copilot, OpenCode and Windsurf with the skills CLI, using each agent's flag shown on this page. Flowy's auto-invocation, which fires a skill when your prompt matches, runs in Claude Code only.