Installs just this skill. Get the whole plugin for auto-invocation.
⚡ How it fires
How this skill gets triggered: by you, by Claude, or both.
Fires itselfClaude auto-loads it when your prompt matches the work.
You can call itInvoke it directly when you want it.
Slash command/primekg
👁️ Context preview
The summary Claude sees to decide when to auto-load this skill.
Query the Precision Medicine Knowledge Graph (PrimeKG) for multiscale biological data including genes, drugs, diseases, phenotypes, and more.
📊 Stats
Stars31,545
Forks3,146
LanguagePython
LicenseMIT
📦 Ships with scientific-agent-skills
</> SKILL.md
primekg.SKILL.md
---name: primekg
description: Query the Precision Medicine Knowledge Graph (PrimeKG) for multiscale biological data including genes, drugs, diseases, phenotypes, and more.
license: Unknown
metadata: {"version": "1.0", "skill-author": "K-Dense Inc. (PrimeKG original from Harvard MIMS)"}
---# PrimeKG Knowledge Graph Skill
## Overview
PrimeKG is a precision medicine knowledge graph that integrates over 20 primary databases and high-quality scientific literature into a single resource. It contains over 100,000 nodes and 4 million edges across 29 relationship types, including drug-target, disease-gene, and phenotype-disease associations.
**Key capabilities:**
- Search for nodes (genes, proteins, drugs, diseases, phenotypes)
- Retrieve direct neighbors (associated entities and clinical evidence)
- Analyze local disease context (related genes, drugs, phenotypes)
- Identify drug-disease paths (potential repurposing opportunities)
**Data access:** Programmatic access via `query_primekg.py`. Data is stored at `C:\Users\eamon\Documents\Data\PrimeKG\kg.csv`.
## When to Use This Skill
This skill should be used when:
- **Knowledge-based drug discovery:** Identifying targets and mechanisms for diseases.
- **Drug repurposing:** Finding existing drugs that might have evidence for new indications.
