Use this skill whenever the user wants to do anything with PDF files. This includes reading or extracting text/tables from PDFs, combining or merging multiple PDFs into one, splitting PDFs apart, rotating pages, adding watermarks, creating new PDFs, filling PDF forms,
Claude Code
$ npx -y skills add K-Dense-AI/claude-scientific-writer --skill pdf --agent claude-code
Codex
$ npx skills add K-Dense-AI/claude-scientific-writer --skill pdf -a codex -y
Cursor
$ npx skills add K-Dense-AI/claude-scientific-writer --skill pdf -a cursor -y
Gemini CLI
$ npx skills add K-Dense-AI/claude-scientific-writer --skill pdf -a gemini-cli -y
GitHub Copilot
$ npx skills add K-Dense-AI/claude-scientific-writer --skill pdf -a github-copilot -y
OpenCode
$ npx skills add K-Dense-AI/claude-scientific-writer --skill pdf -a opencode -y
Windsurf
$ npx skills add K-Dense-AI/claude-scientific-writer --skill pdf -a windsurf -y
SKILL.md
pdf.SKILL.mdname: pdf
description: Use this skill whenever the user wants to do anything with PDF files. This includes reading or extracting text/tables from PDFs, combining or merging multiple PDFs into one, splitting PDFs apart, rotating pages, adding watermarks, creating new PDFs, filling PDF forms, encrypting/decrypting PDFs, extracting images, and OCR on scanned PDFs to make them searchable. If the user mentions a .pdf file or asks to produce one, use this skill.
license: Complete terms in LICENSE.txt
PDF Processing Guide
Overview
This guide covers essential PDF processing operations using Python libraries and command-line tools. For advanced features, JavaScript libraries, and detailed examples, see reference.md. If you need to fill out a PDF form, read forms.md and follow its instructions.
Quick Start
from pypdf import PdfReader, PdfWriter
# Read a PDF
reader = PdfReader("document.pdf")
print(f"Pages: {len(reader.pages)}")
# Extract text
text = ""
for page in reader.pages:
text += page.extract_text()Python Libraries
pypdf - Basic Operations
Merge PDFs
from pypdf import PdfWriter, PdfReader
writer = PdfWriter()
for pdf_file in ["doc1.pdf", "doc2.pdf", "doc3.pdf"]:
reader = PdfReader(pdf_file)
for page in reader.pages:
writer.add_page(page)
with open("merged.pdf", "wb") as output:
writer.write(output)Split PDF
reader = PdfReader("input.pdf")
for i, page in enumerate(reader.pages):
writer = PdfWriter()
writer.add_page(page)
with open(f"page_{i+1}.pdf", "wb") as output:
writer.write(output)Extract Metadata
reader = PdfReader("document.pdf")
meta = reader.metadata
print(f"Title: {meta.title}")
print(f"Author: {meta.author}")
print(f"Subject: {meta.subject}")
print(f"Creator: {meta.creator}")Rotate Pages
reader = PdfReader("input.pdf")
writer = PdfWriter()
page = reader.pages[0]
page.rotate(90) # Rotate 90 degrees clockwise
writer.add_page(page)
with open("rotated.pdf", "wb") as output:
writer.write(output)pdfplumber - Text and Table Extraction
Extract Text with Layout
import pdfplumber
with pdfplumber.open("document.pdf") as pdf:
for page in pdf.pages:
text = page.extract_text()
print(text)Extract Tables
with pdfplumber.open("document.pdf") as pdf:
for i, page in enumerate(pdf.pages):
tables = page.extract_tables()
for j, table in enumerate(tables):
print(f"Table {j+1} on page {i+1}:")
for row in table:
print(row)Advanced Table Extraction
import pandas as pd
with pdfplumber.open("document.pdf") as pdf:
all_tables = []
for page in pdf.pages:
tables = page.extract_tables()
for table in tables:
if table: # Check if table is not empty
df = pd.DataFrame(table[1:], columns=table[0])
all_tables.append(df)
# Combine all tables
if all_tables:
combined_df = pd.concat(all_tables, ignore_index=True)
combined_df.to_excel("extracted_tables.xlsx", index=False)reportlab - Create PDFs
Basic PDF Creation
from reportlab.lib.pagesizes import letter
from reportlab.pdfgen import canvas
c = canvas.Canvas("hello.pdf", pagesize=letter)
width, height = letter
# Add text
c.drawString(100, height - 100, "Hello World!")
c.drawString(100, height - 120, "This is a PDF created with reportlab")
# Add a line
c.line(100, height - 140, 400, height - 140)
# Save
c.save()Create PDF with Multiple Pages
from reportlab.lib.pagesizes import letter
from reportlab.platypus import SimpleDocTemplate, Paragraph, Spacer, PageBreak
from reportlab.lib.styles import getSampleStyleSheet
doc = SimpleDocTemplate("report.pdf", pagesize=letter)
styles = getSampleStyleSheet()
story = []
# Add content
title = Paragraph("Report Title", styles['Title'])
story.append(title)
story.append(Spacer(1, 12))
body = Paragraph("This is the body of the report. " * 20, styles['Normal'])
story.append(body)
story.append(PageBreak())
# Page 2
story.append(Paragraph("Page 2", styles['Heading1']))
story.append(Paragraph("Content for page 2", styles['Normal']))
# Build PDF
doc.build(story)Subscripts and Superscripts
**IMPORTANT**: Never use Unicode subscript/superscript characters (ββββββ
ββββ, β°ΒΉΒ²Β³β΄β΅βΆβ·βΈβΉ) in ReportLab PDFs. The built-in fonts do not include these glyphs, causing them to render as solid black boxes.
Instead, use ReportLab's XML markup tags in Paragraph objects:
from reportlab.platypus import Paragraph
from reportlab.lib.styles import getSampleStyleSheet
styles = getSampleStyleSheet()
# Subscripts: use <sub> tag
chemical = Paragraph("H<sub>2</sub>O", styles['Normal'])
# Superscripts: use <super> tag
squared = Paragraph("x<super>2</super> + y<super>2</super>", styles['Normal'])For canvas-drawn text (not Paragraph objects), manually adjust font the size and position rather than using Unicode subscripts/superscripts.
Command-Line Tools
pdftotext (poppler-utils)
# Extract text
pdftotext input.pdf output.txt
# Extract text preserving layout
pdftotext -layout input.pdf output.txt
# Extract specific pages
pdftotext -f 1 -l 5 input.pdf output.txt # Pages 1-5
qpdf
# Merge PDFs
qpdf --empty --pages file1.pdf file2.pdf -- merged.pdf
# Split pages
qpdf input.pdf --pages . 1-5 -- pages1-5.pdf
qpdf input.pdf --pages . 6-10 -- pages6-10.pdf
# Rotate pages
qpdf input.pdf output.pdf --rotate=+90:1 # Rotate page 1 by 90 degrees
# Remove password
qpdf --password=mypassword --decrypt encrypted.pdf decrypted.pdf
pdftk (if available)
# Merge
pdftk file1.pdf file2.pdf cat output merged.pdf
# Split
pdftk input.pdf burst
# Rotate
pdftk input.pdf rotate 1east output rotated.pdf
Common Tasks
Extract Text from Scanned PDFs
Read more
name: pdf description: Use this skill whenever the user wants to do anything with PDF files. This includes reading or extracting text/tables from PDFs, combining or merging multiple PDFs into one, splitting PDFs apart, rotating pages, adding watermarks, creating new PDFs, filling PDF forms, encrypting/decrypting PDFs, extracting images, and OCR on scanned PDFs to make them searchable. If the user mentions a .pdf file or asks to produce one, use this skill. license: Complete terms in LICENSE.txt
PDF Processing Guide
Overview
This guide covers essential PDF processing operations using Python libraries and command-line tools. For advanced features, JavaScript libraries, and detailed examples, see reference.md. If you need to fill out a PDF form, read forms.md and follow its instructions.
Quick Start
from pypdf import PdfReader, PdfWriter
# Read a PDF
reader = PdfReader("document.pdf")
print(f"Pages: {len(reader.pages)}")
# Extract text
text = ""
for page in reader.pages:
text += page.extract_text()Python Libraries
pypdf - Basic Operations
Merge PDFs
from pypdf import PdfWriter, PdfReader
writer = PdfWriter()
for pdf_file in ["doc1.pdf", "doc2.pdf", "doc3.pdf"]:
reader = PdfReader(pdf_file)
for page in reader.pages:
writer.add_page(page)
with open("merged.pdf", "wb") as output:
writer.write(output)Split PDF
reader = PdfReader("input.pdf")
for i, page in enumerate(reader.pages):
writer = PdfWriter()
writer.add_page(page)
with open(f"page_{i+1}.pdf", "wb") as output:
writer.write(output)Extract Metadata
reader = PdfReader("document.pdf")
meta = reader.metadata
print(f"Title: {meta.title}")
print(f"Author: {meta.author}")
print(f"Subject: {meta.subject}")
print(f"Creator: {meta.creator}")Rotate Pages
reader = PdfReader("input.pdf")
writer = PdfWriter()
page = reader.pages[0]
page.rotate(90) # Rotate 90 degrees clockwise
writer.add_page(page)
with open("rotated.pdf", "wb") as output:
writer.write(output)pdfplumber - Text and Table Extraction
Extract Text with Layout
import pdfplumber
with pdfplumber.open("document.pdf") as pdf:
for page in pdf.pages:
text = page.extract_text()
print(text)Extract Tables
with pdfplumber.open("document.pdf") as pdf:
for i, page in enumerate(pdf.pages):
tables = page.extract_tables()
for j, table in enumerate(tables):
print(f"Table {j+1} on page {i+1}:")
for row in table:
print(row)Advanced Table Extraction
import pandas as pd
with pdfplumber.open("document.pdf") as pdf:
all_tables = []
for page in pdf.pages:
tables = page.extract_tables()
for table in tables:
if table: # Check if table is not empty
df = pd.DataFrame(table[1:], columns=table[0])
all_tables.append(df)
# Combine all tables
if all_tables:
combined_df = pd.concat(all_tables, ignore_index=True)
combined_df.to_excel("extracted_tables.xlsx", index=False)reportlab - Create PDFs
Basic PDF Creation
from reportlab.lib.pagesizes import letter
from reportlab.pdfgen import canvas
c = canvas.Canvas("hello.pdf", pagesize=letter)
width, height = letter
# Add text
c.drawString(100, height - 100, "Hello World!")
c.drawString(100, height - 120, "This is a PDF created with reportlab")
# Add a line
c.line(100, height - 140, 400, height - 140)
# Save
c.save()Create PDF with Multiple Pages
from reportlab.lib.pagesizes import letter
from reportlab.platypus import SimpleDocTemplate, Paragraph, Spacer, PageBreak
from reportlab.lib.styles import getSampleStyleSheet
doc = SimpleDocTemplate("report.pdf", pagesize=letter)
styles = getSampleStyleSheet()
story = []
# Add content
title = Paragraph("Report Title", styles['Title'])
story.append(title)
story.append(Spacer(1, 12))
body = Paragraph("This is the body of the report. " * 20, styles['Normal'])
story.append(body)
story.append(PageBreak())
# Page 2
story.append(Paragraph("Page 2", styles['Heading1']))
story.append(Paragraph("Content for page 2", styles['Normal']))
# Build PDF
doc.build(story)Subscripts and Superscripts
**IMPORTANT**: Never use Unicode subscript/superscript characters (ββββββ ββββ, β°ΒΉΒ²Β³β΄β΅βΆβ·βΈβΉ) in ReportLab PDFs. The built-in fonts do not include these glyphs, causing them to render as solid black boxes.
Instead, use ReportLab's XML markup tags in Paragraph objects:
from reportlab.platypus import Paragraph
from reportlab.lib.styles import getSampleStyleSheet
styles = getSampleStyleSheet()
# Subscripts: use <sub> tag
chemical = Paragraph("H<sub>2</sub>O", styles['Normal'])
# Superscripts: use <super> tag
squared = Paragraph("x<super>2</super> + y<super>2</super>", styles['Normal'])For canvas-drawn text (not Paragraph objects), manually adjust font the size and position rather than using Unicode subscripts/superscripts.
Command-Line Tools
pdftotext (poppler-utils)
# Extract text pdftotext input.pdf output.txt # Extract text preserving layout pdftotext -layout input.pdf output.txt # Extract specific pages pdftotext -f 1 -l 5 input.pdf output.txt # Pages 1-5
qpdf
# Merge PDFs qpdf --empty --pages file1.pdf file2.pdf -- merged.pdf # Split pages qpdf input.pdf --pages . 1-5 -- pages1-5.pdf qpdf input.pdf --pages . 6-10 -- pages6-10.pdf # Rotate pages qpdf input.pdf output.pdf --rotate=+90:1 # Rotate page 1 by 90 degrees # Remove password qpdf --password=mypassword --decrypt encrypted.pdf decrypted.pdf
pdftk (if available)
# Merge pdftk file1.pdf file2.pdf cat output merged.pdf # Split pdftk input.pdf burst # Rotate pdftk input.pdf rotate 1east output rotated.pdf
Common Tasks
Extract Text from Scanned PDFs
π Looking for more advanced capabilities? For end-to-end scientific writing, deep scientific search, advanced image generation and enterprise solutions, visit www.k-dense.ai Stay up to date: Read the K-Dense blog, and follow us on X, LinkedIn, and YouTube
Other skills on claude-scientific-writer.
clinical-decision-suppβ¦
Prepare and validate research-only clinical decision-support evaluation, evidence-profile, cohort, survival, biomarker/model,β¦
clinical-reports
Create safety-bounded draft structures and run local deterministic checks for clinical case, diagnostic, trial, safety, andβ¦
docx
Use this skill whenever the user wants to create, read, edit, or manipulate Word documents (.docx files) or Word templates (.dotxβ¦
hypothesis-generation
Formulate evidence-bounded scientific questions, candidate hypotheses, rival explanations, causal or associational claims,β¦
More skills from other plugins.
prompt-lookup
Activates when the user asks about AI prompts, needs prompt templates, wants to search for prompts, or mentions prompts.chat. Useβ¦
ppt-master
AI-driven presentation workflow for generating editable PPTX decks and slides, reconstructing page visuals, creating reusableβ¦
morph-ppt
Use this skill when the user wants a .pptx with smooth cross-slide animation β PowerPoint Morph transitions, Keynote-styleβ¦
frontend-slides
Create stunning, animation-rich HTML presentations from scratch or by converting PowerPoint files. Use when the user wants toβ¦
Questions about pdf.
- Which coding agents can use pdf?
- pdf installs in Claude Code, Codex, Cursor, Gemini CLI, GitHub Copilot, OpenCode and Windsurf with the skills CLI, using each agent's flag shown on this page. Flowy's auto-invocation, which fires a skill when your prompt matches, runs in Claude Code only.

