13c-metabolic-flux
Estimates intracellular metabolic fluxes from steady-state carbon-13 isotope-tracing measurements using validated atom maps,…
Supports structured what-if scenario analysis for research planning, experimental contingencies, and scientific project decisions. Explores favorable, reference, adverse, wild-card, contrarian, and second-order scenarios with explicit assumptions, evidence, and decision
Claude Code
$ npx -y skills add K-Dense-AI/scientific-agent-skills --skill what-if-oracle --agent claude-code
Codex
$ npx skills add K-Dense-AI/scientific-agent-skills --skill what-if-oracle -a codex -y
Cursor
$ npx skills add K-Dense-AI/scientific-agent-skills --skill what-if-oracle -a cursor -y
Gemini CLI
$ npx skills add K-Dense-AI/scientific-agent-skills --skill what-if-oracle -a gemini-cli -y
GitHub Copilot
$ npx skills add K-Dense-AI/scientific-agent-skills --skill what-if-oracle -a github-copilot -y
OpenCode
$ npx skills add K-Dense-AI/scientific-agent-skills --skill what-if-oracle -a opencode -y
Windsurf
$ npx skills add K-Dense-AI/scientific-agent-skills --skill what-if-oracle -a windsurf -y
name: what-if-oracle description: Supports structured what-if scenario analysis for research planning, experimental contingencies, and scientific project decisions. Explores favorable, reference, adverse, wild-card, contrarian, and second-order scenarios with explicit assumptions, evidence, and decision triggers. Use to stress-test a research plan under uncertainty; scenario narratives do not estimate causal effects or calibrated forecast probabilities. license: CC BY-NC-SA 4.0 metadata: version: "1.3" last-reviewed: "2026-10-01" skill-author: AHK Strategies (ashrafkahoush-ux) upstream: https://github.com/ashrafkahoush-ux/claude-consciousness-skills research-doi: 10.5281/zenodo.18736841, 10.5281/zenodo.18807387
Explore a bounded set of possible futures before committing research resources. The output is a scenario comparison, an evidence ledger, and a contingency plan. It does not cover the full possibility space or establish that a narrated mechanism will occur.
The six branch prompts and **0·IF·1** mnemonic come from the upstream What-If framework. Treat the mnemonic as a framing aid: a potential change (**0**), a stated condition (**IF**), and a resulting scenario (**1**). It is not a scientific law or a computational model.
The author's [What-If Paradigm](https://doi.org/10.5281/zenodo.18736841) and [Unified Theory of Digital Consciousness](https://doi.org/10.5281/zenodo.18807387) are catalogued by Zenodo as preprints. Their deposit and DOI establish provenance, not forecasting accuracy or empirical validation of this workflow.
Use for questions such as:
Keep the analysis attached to a scientific decision. This is not a general business, personal advice, or software architecture skill. If the question requires an intervention effect, a power calculation, or a numerical simulation, identify the required design/model and evidence; do not manufacture those results with scenario prose.
No package, API endpoint, credential, or network connection is required for the qualitative workflow. Verify current external facts when they matter, or label the analysis as based only on supplied material. For research-specific prompts and a worked example, see [references/scenario-templates.md](references/scenario-templates.md).
Write one operational question containing:
For example: "If the usable-sample fraction is 60% rather than the planned 80%, can a batch of 100 samples deliver 80 usable samples this month, and which contingency should we prepare?" Both fractions may be planning assumptions until supported by data.
Use the user's supplied framing when sufficient. State reasonable working assumptions and proceed; ask for a missing fact only when it materially changes the analysis.
Maintain a short evidence ledger: claim, source or data version/date, relevant population/protocol, uncertainty, and status (**observed**, **model-derived**, or **assumed**). Record conflicting evidence. An LLM-generated rationale is not an additional observation or an independent expert assessment.
Select distinct scenarios suited to the question, usually four to six. A short screening can use favorable, reference, and adverse scenarios. The labels below are exploration lenses, not mutually exclusive outcomes or a probability distribution.
| Lens | What to examine | Scientific boundary | | --- | --- | --- | | **Ω Favorable (best case)** | Favorable conditions within justified bounds | Not a proven upper limit; specify whose outcome improves | | **α Reference case** | A stated baseline or central set of assumptions | Call it "likely" only if comparative evidence supports that ranking | | **Δ Adverse (worst case)** | Plausible failures, including dependent failures | Not a proven lower limit or the worst imaginable outcome | | **Ψ Wild card** | A concrete disruption outside the main assumptions | Do not claim to enumerate unknowable events or assign a rarity from the label | | **Φ Contrarian** | An alternative to a dominant hypothesis | Evaluate supporting and disconfirming evidence; disagreement alone is not support | | **∞ Second order** | Downstream effects, delays, feedback, or changed behavior | Can occur within any other scenario; mark untested mechanisms as hypotheses |
Retain important shared drivers and correlations across branches. Avoid implausible combinations created by independently toggling quantities that share a cause. Use descriptive scenario names in the final output so favorable/adverse labels do not substitute for evaluation.
Use a compact record:
Scenario: [name and lens] Condition and horizon: [operational definition] Assumptions: [including dependencies and boundary conditions] Evidence: [source/data version, supporting and conflicting observations] Mechanism: [conditional narrative; identify untested causal links] Consequences: [outcomes, units, range, and relevant time points] Likelihood: [not estimated, or justified estimate with
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