13c-metabolic-flux
Estimates intracellular metabolic fluxes from steady-state carbon-13 isotope-tracing measurements using validated atom maps,โฆ
Creates Seaborn statistical visualizations with pandas integration for distributions, relationships, categorical comparisons, regression displays, pair plots, and heatmaps. Supports function and objects interfaces with explicit aggregation, uncertainty, and missing-data
Claude Code
$ npx -y skills add K-Dense-AI/scientific-agent-skills --skill seaborn --agent claude-code
Codex
$ npx skills add K-Dense-AI/scientific-agent-skills --skill seaborn -a codex -y
Cursor
$ npx skills add K-Dense-AI/scientific-agent-skills --skill seaborn -a cursor -y
Gemini CLI
$ npx skills add K-Dense-AI/scientific-agent-skills --skill seaborn -a gemini-cli -y
GitHub Copilot
$ npx skills add K-Dense-AI/scientific-agent-skills --skill seaborn -a github-copilot -y
OpenCode
$ npx skills add K-Dense-AI/scientific-agent-skills --skill seaborn -a opencode -y
Windsurf
$ npx skills add K-Dense-AI/scientific-agent-skills --skill seaborn -a windsurf -y
name: seaborn description: Creates Seaborn statistical visualizations with pandas integration for distributions, relationships, categorical comparisons, regression displays, pair plots, and heatmaps. Supports function and objects interfaces with explicit aggregation, uncertainty, and missing-data handling. Best suited to static exploratory plots; plotly covers interactive figures and scientific-visualization covers publication styling. license: BSD-3-Clause license allowed-tools: Read Write Edit Bash compatibility: Requires Python 3.8+ with seaborn 0.13.2, NumPy, pandas, and Matplotlib; the tested current dependency stack requires Python 3.12+. Optional scipy/statsmodels for advanced regression or clustering, ipywidgets for notebook controls. Network only for installation or uncached example datasets. metadata: version: "1.5" last-reviewed: "2026-10-01" upstream-version: "0.13.2" skill-author: K-Dense Inc.
Seaborn is a Python visualization library for creating publication-quality statistical graphics. Use this skill for dataset-oriented plotting, multivariate analysis, automatic statistical estimation, and complex multi-panel figures with minimal code.
Reviewed 2026-10-01 against the current stable [Seaborn 0.13.2 documentation](https://seaborn.pydata.org/api.html) and released source. Native synthetic checks used Python 3.13, Seaborn 0.13.2, Matplotlib 3.11.2, pandas 3.0.6, NumPy 2.5.3, SciPy 1.18.1, and statsmodels 0.15.0. Official docs support Python 3.8+ with mandatory NumPy, pandas, and matplotlib dependencies; scipy, statsmodels, and fastcluster are optional for some advanced statistics and clustering workflows. The tested stack emits upstream pandas Copy-on-Write and Matplotlib deprecation warnings; successful current plots do not guarantee compatibility with future pandas 4 or Matplotlib 3.13.
# Reproducible install for examples in this skill uv pip install "seaborn==0.13.2" # Include optional statistical dependencies when needed uv pip install "seaborn[stats]==0.13.2"
Recommended imports:
import numpy as np import pandas as pd import matplotlib.pyplot as plt import seaborn as sns import seaborn.objects as so
`sns.load_dataset()` downloads public CSV example data from the moving `mwaskom/seaborn-data` repository when it is not cached; it returns a DataFrame and applies some dataset-specific preprocessing. No credentials are required. Cache presence does not establish dataset version: record the source revision or file hash for reproducibility. For private, regulated, or offline work, load local files explicitly with pandas and pass the resulting DataFrame to seaborn.
Seaborn follows these core principles:
1. **Dataset-oriented**: Work directly with DataFrames and named variables rather than abstract coordinates 2. **Semantic mapping**: Automatically translate data values into visual properties (colors, sizes, styles) 3. **Statistical awareness**: Built-in aggregation, error estimation, and confidence intervals 4. **Aesthetic defaults**: Publication-ready themes and color palettes out of the box 5. **Matplotlib integration**: Matplotlib axes and artists support further customization
import seaborn as sns
import matplotlib.pyplot as plt
import pandas as pd
# Load example dataset
df = sns.load_dataset('tips')
# Create a simple visualization
sns.scatterplot(data=df, x='total_bill', y='tip', hue='day')
plt.show()The function interface provides specialized plotting functions organized by visualization type. Each category has **axes-level** functions (plot to single axes) and **figure-level** functions (manage entire figure with faceting).
**When to use:**
The `seaborn.objects` interface provides a declarative, composable API similar to ggplot2. Build visualizations by chaining methods to specify data mappings, marks, transformations, and scales. Upstream still describes this interface as experimental and incomplete in 0.13.2, although stable enough for serious use; prefer the function interface for conservative production code unless the compositional API materially simplifies the plot.
**When to use:**
from seaborn import objects as so
# Declarative syntax
(
so.Plot(data=df, x='total_bill', y='tip')
.add(so.Dot(), color='day')
.add(so.Line(), so.PolyFit(order=1))
)Seaborn 0.12 and 0.13 changed several common plotting patterns:
Each variable is a column, each observation is a row. Retain subject/sample IDs when reshaping; rows from the
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