Research
Plugin
protein-design-skills
Claude Code skills for protein design.
Plugin Signal56/100Fair
maintained40
capable67
documented75
adopted48
Install on Claude Code
> /plugin marketplace add adaptyvbio/protein-design-skills> /plugin install adaptyv@protein-design-skills
Stats
170
Stars
24
Forks
Maintained
Maintenance
MIT
License
4mo ago
Last commit
9mo ago
Created
3d ago
Added
What's inside
Skill(24 skills)
/alphafoldValidate protein designs using AlphaFold2 structure prediction. Use this skill when: (1) Validating designed sequences fold correctly, (2) Predicting binder-target complex structures, (3) Calculating confidence metrics (pLDDT, pTM, ipTM), (4) Self-consistency validation of/bindcraftEnd-to-end binder design using BindCraft hallucination. Use this skill when: (1) Designing protein binders with built-in AF2 validation, (2) Running production-quality binder campaigns, (3) Using different design protocols (fast, default, slow), (4) Need joint backbone and/binder-designGuidance for choosing the right protein binder design tool. Use this skill when: (1) Deciding between BoltzGen, BindCraft, or RFdiffusion, (2) Planning a binder design campaign, (3) Understanding trade-offs between different approaches, (4) Selecting tools for specific target
README
Install
/plugin marketplace add adaptyvbio/protein-design-skills
/plugin install adaptyv@protein-design-skills
Setup (first time)
Skills
Pipeline
Quick start
"Design a binder for PDB 1ALU"
Claude will pick the right skills for the target (for example BoltzGen → Chai → QC, or RFdiffusion → ProteinMPNN → Chai → QC).
Links
Contributing
Creating a new skill
The easiest way to create a new skill is with Claude Code:
/skill skill-creator
This uses Anthropic's skill-creator to guide you through the process.
See CONTRIBUTING.md for detailed guidelines.
License
MIT
References
- biomodals - Modal execution wrappers
- Anthropic Skills - Skills specification
File tree
FAQ
protein-design-skills is a Claude Code plugin with 24 hand-picked skills, indexed on Flowy in the Research category. Install it with the command on its page. It includes alphafold, bindcraft, binder-design. Its skills do not fire on their own yet. Request auto-invocation to have Flowy route them as you prompt. Free and open source.
- What is protein-design-skills?
- Claude Code skills for protein design
- How do I install protein-design-skills?
- Run these in Claude Code: /plugin marketplace add adaptyvbio/protein-design-skills then /plugin install adaptyv@protein-design-skills. Then prompt normally.
- Does protein-design-skills auto-invoke its skills?
- Not yet. It is indexed on Flowy as a plain plugin. Request auto-invocation on its page and Flowy will route its skills for you as you prompt.
- Is protein-design-skills free?
- Yes. Flowy is free and open source, with nothing gated. You can read every skill in full before you install.
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