Helps a bioinformatics or biostatistics analyst run common analyses in Claude Code, from Bayesian models and survival analysis to statistical tests with reporting and regression. Each analysis is guided step by step instead of built from scratch.
@jaechang-hitsAPI + Python SDK for ordering cell-free protein expression and binding assays. Submit sequences for expression (10–100 µg),…
@jaechang-hitsscikit-learn compatible Python toolkit for time series ML: classify, cluster, regress, segment, transform with 30+ algorithms…
@jaechang-hitsAiZynthFinder retrosynthetic route planning (CASP) from AstraZeneca Molecular AI. Monte Carlo tree search guided by a…
@jaechang-hitsAccess AlphaFold DB's 200M+ predicted structures by UniProt ID. Download PDB/mmCIF, analyze pLDDT/PAE, bulk-fetch proteomes via…
@jaechang-hitsAnnotated matrices for single-cell genomics. Stores X with obs/var metadata, layers, embeddings (obsm/varm), graphs (obsp/varp),…
@jaechang-hitsGRN inference from expression via GRNBoost2 (gradient boosting) or GENIE3 (Random Forest). Load matrix, filter by TFs, infer…
@jaechang-hitsQuery ARCHS4 REST API for uniformly processed RNA-seq expression, tissue patterns, co-expression across 1M+ human/mouse samples.…
@jaechang-hitsCore Python library for astronomy/astrophysics: units with dimensional analysis, celestial coordinate transforms…
@jaechang-hitsMolecular docking with AutoDock Vina (Python API). Receptor/ligand prep (Meeko + RDKit), grid box, docking, pose and binding…
@jaechang-hitsAnnotate bacterial and archaeal genomes and plasmids with Bakta's Prodigal/HMM/diamond pipeline. Identifies CDS, ncRNA, tRNA,…
@jaechang-hitsCLI for VCF/BCF: filter, merge, annotate, query, normalize, compute stats. Core post-variant-calling: quality filtering,…
@jaechang-hitsGenomic interval ops on BED/BAM/GFF/VCF. Find overlaps, merge intervals, compute coverage, extract FASTA, find nearest features.…
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