/anomaly-detection

name: Anomaly Detection
description: Identify unusual patterns, outliers, and anomalies in data using statistical methods, isolation forests, and autoencoders for fraud detection and quality monitoring

Anomaly Detection

Overview

Anomaly detection identifies unusual patterns, outliers, and anomalies in data that deviate significantly from normal behavior, enabling fraud detection and system monitoring.

When to Use

• Detecting fraudulent transactions or suspicious activity in financial data
• Identifying system failures, network intrusions, or security breaches
• Monitoring manufacturing quality and identifying defective products
• Finding unusual patterns in healthcare data or patient vital signs
• Detecting abnormal sensor readings in IoT or industrial systems
• Identifying outliers in customer behavior for targeted intervention

Detection Methods

• **Statistical**: Z-score, IQR, modified Z-score
• **Distance-based**: K-nearest neighbors, Local Outlier Factor
• **Isolation**: Isolation Forest
• **Density-based**: DBSCAN
• **Deep Learning**: Autoencoders, GANs

Anomaly Types

• **Point Anomalies**: Single unusual records
• **Contextual**: Unusual in specific context
• **Collective**: Unusual patterns in sequences
• **Novel Classes**: Completely new patterns

Implementation with Python

import pandas as pd
import numpy as np
import matplotlib.pyplot as plt
import seaborn as sns
from sklearn.preprocessing import StandardScaler
from sklearn.ensemble import IsolationForest
from sklearn.neighbors import LocalOutlierFactor
from sklearn.covariance import EllipticEnvelope
from scipy import stats

# Generate sample data with anomalies
np.random.seed(42)

# Normal data
n_normal = 950
normal_data = np.random.normal(100, 15, (n_normal, 2))

# Anomalies
n_anomalies = 50
anomalies = np.random.uniform(0, 200, (n_anomalies, 2))
anomalies[n_anomalies//2:, 0] = np.random.uniform(80, 120, n_anomalies//2)
anomalies[n_anomalies//2:, 1] = np.random.uniform(-50, 0, n_anomalies//2)

X = np.vstack([normal_data, anomalies])
y_true = np.hstack([np.zeros(n_normal), np.ones(n_anomalies)])

df = pd.DataFrame(X, columns=['Feature1', 'Feature2'])
df['is_anomaly_true'] = y_true

print("Data Summary:")
print(f"Normal samples: {n_normal}")
print(f"Anomalies: {n_anomalies}")
print(f"Total: {len(df)}")

# Standardize
scaler = StandardScaler()
X_scaled = scaler.fit_transform(X)

# 1. Statistical Methods (Z-score)
z_scores = np.abs(stats.zscore(X))
z_anomaly_mask = (z_scores > 3).any(axis=1)
df['z_score_anomaly'] = z_anomaly_mask

print(f"\n1. Z-score Method:")
print(f"Anomalies detected: {z_anomaly_mask.sum()}")
print(f"Accuracy: {(z_anomaly_mask == y_true).mean():.2%}")

# 2. Isolation Forest
iso_forest = IsolationForest(contamination=n_anomalies/len(df), random_state=42)
iso_predictions = iso_forest.fit_predict(X_scaled)
iso_anomaly_mask = iso_predictions == -1
iso_scores = iso_forest.score_samples(X_scaled)

df['iso_anomaly'] = iso_anomaly_mask
df['iso_score'] = iso_scores

print(f"\n2. Isolation Forest:")
print(f"Anomalies detected: {iso_anomaly_mask.sum()}")
print(f"Accuracy: {(iso_anomaly_mask == y_true).mean():.2%}")

# 3. Local Outlier Factor
lof = LocalOutlierFactor(n_neighbors=20, contamination=n_anomalies/len(df))
lof_predictions = lof.fit_predict(X_scaled)
lof_anomaly_mask = lof_predictions == -1
lof_scores = lof.negative_outlier_factor_

df['lof_anomaly'] = lof_anomaly_mask
df['lof_score'] = lof_scores

print(f"\n3. Local Outlier Factor:")
print(f"Anomalies detected: {lof_anomaly_mask.sum()}")
print(f"Accuracy: {(lof_anomaly_mask == y_true).mean():.2%}")

# 4. Elliptic Envelope (Robust Covariance)
ee = EllipticEnvelope(contamination=n_anomalies/len(df), random_state=42)
ee_predictions = ee.fit_predict(X_scaled)
ee_anomaly_mask = ee_predictions == -1
ee_scores = ee.mahalanobis(X_scaled)

df['ee_anomaly'] = ee_anomaly_mask
df['ee_score'] = ee_scores

print(f"\n4. Elliptic Envelope:")
print(f"Anomalies detected: {ee_anomaly_mask.sum()}")
print(f"Accuracy: {(ee_anomaly_mask == y_true).mean():.2%}")

# 5. IQR Method
Q1 = np.percentile(X, 25, axis=0)
Q3 = np.percentile(X, 75, axis=0)
IQR = Q3 - Q1
lower_bound = Q1 - 1.5 * IQR
upper_bound = Q3 + 1.5 * IQR

iqr_anomaly_mask = ((X < lower_bound) | (X > upper_bound)).any(axis=1)
df['iqr_anomaly'] = iqr_anomaly_mask

print(f"\n5. IQR Method:")
print(f"Anomalies detected: {iqr_anomaly_mask.sum()}")
print(f"Accuracy: {(iqr_anomaly_mask == y_true).mean():.2%}")

# Visualization of anomaly detection methods
fig, axes = plt.subplots(2, 3, figsize=(15, 10))

methods = [
    (z_anomaly_mask, 'Z-score', None),
    (iso_anomaly_mask, 'Isolation Forest', iso_scores),
    (lof_anomaly_mask, 'LOF', lof_scores),
    (ee_anomaly_mask, 'Elliptic Envelope', ee_scores),
    (iqr_anomaly_mask, 'IQR', None),
]

# True anomalies
ax = axes[0, 0]
colors = ['blue' if not a else 'red' for a in y_true]
ax.scatter(df['Feature1'], df['Feature2'], c=colors, alpha=0.6, s=30)
ax.set_title('True Anomalies')
ax.set_xlabel('Feature 1')
ax.set_ylabel('Feature 2')

# Plot each method
for idx, (anomaly_mask, method_name, scores) in enumerate(methods):
    ax = axes.flatten()[idx + 1]

    if scores is not None:
        scatter = ax.scatter(df['Feature1'], df['Feature2'], c=scores, cmap='RdYlBu_r', alpha=0.6, s=30)
        plt.colorbar(scatter, ax=ax, label='Score')
    else:
        colors = ['red' if a else 'blue' for a in anomaly_mask]
        ax.scatter(df['Feature1'], df['Feature2'], c=colors, alpha=0.6, s=30)

    ax.set_title(f'{method_name}\n({anomaly_mask.sum()} anomalies)')
    ax.set_xlabel('Feature 1')
    ax.set_ylabel('Feature 2')

plt.tight_layout()
plt.show()

# 6. Anomaly score comparison
fig, axes = plt.subplots(2, 2, figsize=(14, 8))

# ISO Forest scores
axes[0, 0].hist(iso_scores[~y_true], bins=30, alpha=0.7, label='Normal', color='blue')
axes[0, 0].hist(iso_scores[y_true == 1], bins=10, alpha=0.7, label='Anomaly', color='red')
axes[0, 0].set_xlabel(